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  • With equipment of last generation, scientists linked to FAPESP Program for Research on Bioenergy (BIOEN) begin to decipher genome of sugar cane. Read the news Pontapé inicial (Authorship: Agência FAPESP).

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The SUCAST Catalogue

 

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The Project

The SUCAST Catalogue contains over 3500 components, with around 2900 involved in several aspects of cell signalling and transcription. Extensive annotation, sequence comparisons and conserved protein domain analysis were used to cathegorize receptors, protein kinases, protein phosphatases, small GTPases, G-proteins, calcium and inositol metabolism proteins and other signal transductio-related proteins. Over 600 transcription factors were also indexed. Whenever possible the components were linked to putative pathways. The characterization of their expression profile in the different sugarcane tissues and in plants submitted to biotic and abiotic stress is underway.

Please send any requests or problem reports to the bioinformatics team (This email address is being protected from spambots. You need JavaScript enabled to view it. ).

 

General Coordinator: Glaucia Souza - Department of Biochemistry - University of São Paulo

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